iSC.MEB: installation

Install the iSC.MEB

This vignette provides an introduction to the R package iSC.MEB, where the function iSC.MEB implements the model iSCMEB, a integrate spatial clustering analysis method with hidden Markov random field using empirical Bayes. The package can be installed with the following command from Github:

install.packages('devtools')
devtools::install_github("XiaoZhangryy/iSC.MEB")

The package can be loaded with the command:

library("iSC.MEB")
#> Loading required package: gtools
#> Loading required package: ggplot2

Setup on Linux or MacOS system

For running big data, users can use the following system command to set the C_stack unlimited in case of R Error: C stack usage is too close to the limit.

ulimit -s unlimited